Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903572.1_cds_XP_016453667.1_47768
CDS Infomation

[gene=LOC107778007] [db_xref=GeneID:107778007] [protein=serine/threonine-protein kinase HT1-like] [protein_id=XP_016453667.1] [location=join(11791..12561,12783..13238,13564..13860)] [gbkey=CDS]
Sequence

ATGGATGAAGAGGTTAATTCTTGGATTAGGAGAACAAAGTTTTCTCATACAGTTTGTCAT
AGGTTGGATTCTGCAAGATTGGCCTCTATTCCTTTTACTATTCAGTCAGAAAGAATTGCA
GGTGCAAAAACAAGACCTGAAACTGCTTCTCCTAATCCAAGACCTGAGCCAACCGTTGTG
CGACTTCAGCGCAACCCAACTACAAACAAACAGAGGACTGTATCACCTCATCCAGAAACA
GCAATTTCCGATACCTTTAAGGAAGCTCGATCTAGTCAGAAGAGATTCTCAACTCCACAT
CCACAAAGGAAGGAACATGAGAAGAAAATTATGAGCAAGTCGTTTCACAAAGATTCCCGC
GGAACAAAGTCGCCTATGTTAAGGTCNTTGTTAAGGTCTCCTGGTTCGAGATCTCCAGCA
AATACAAGTCCCCTTCGGCATTTCACGTCAATGAAGTTCCATGATAAATCAAAGAGCCGG
AAGGATTCAGCATGGAGTAGGTACTTTGATCATGGTGTTGGTAGGGTCAGTTCTGTAGAA
ACAGCAGATGAATATACAATTGATCTTTCTAAGCTGTTTCTTGGGCTAAGATTTGCACAC
GGTGCGCACAGTCAGCTTTACCACGGGAAATACAAGGATGAAGCTGTCGCGGTGAAAATT
ATTAGAATACCAGATAATGACGAAATTGGAGCTTTAGCAACTCGATTGGAGAATCAGTTT
ATTAGAGAAGTTACTCTCTTGTCTCGTCTCCACCATCCAAATGTTGTAAAGTTCGTAGGT
GCATGCAAACAACCACCAGTCTTTTGTGTTGTTACTGAGTATCTATCGGAGGGTTCTTTG
AGAGCATACCTGCATAAGCTTGAGCATAAATCCCTAATCTTGGGCAAATTGATAGCACTT
TCCATGGATATTGCTCGTGGAATGGAATATATTCACTCACAAGACATTATTCATCGGGAC
CTCAAACCAGAGAATATACTTATCAGTGAGGAATTTCACCTGAAAATTGCTGATTTTGGA
ATTGCTTGTGAGGAGGCATACTGTGATCTCCTGGCTGATGATCCAGGTACTTACCGTTGG
ATGGCACCAGAGATGATTAAGAGAAAATCATATGGCCGGAAGGTTGATGTGTATGGCTTT
GGACTCATTCTATGGGAAATGGTGGCTGGAACCATTCCTTATGAAGATATGACACCAGTA
CAGGCTGCTTTTGCTGTCGTAAACAAGAATATGCGACCACCTATTCCTGGGGATTGCCCT
CCAGCCATGAAAGCTTTAATTGAACTGTGTTGGGCTCTGCAGCCAGAAAAGAGGCCTGAG
TTTTGGCAGATTGTGAAGGTACTGGAGCAGTTCGAGTCATCAGTTGCTCATGACGGAACT
CTGAATCTTGTGCAAAAGTCAATGTTGCAAGATCACAAGAAAGGGCTTCATCATTGGATC
CAAAAGCTTGGTCCCGTACATCAAAATGCTTCGTTACATCAAATTGCCTCATCAATGCCA
ATGCCGAAACCCAAGTTCGCTTGA

Peptide Sequence

PEP ID

XP_016453667.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana tabacum]
Sequence

MDEEVNSWIRRTKFSHTVCHRLDSARLASIPFTIQSERIAGAKTRPETASPNPRPEPTVV
RLQRNPTTNKQRTVSPHPETAISDTFKEARSSQKRFSTPHPQRKEHEKKIMSKSFHKDSR
GTKSPMLRSLLRSPGSRSPANTSPLRHFTSMKFHDKSKSRKDSAWSRYFDHGVGRVSSVE
TADEYTIDLSKLFLGLRFAHGAHSQLYHGKYKDEAVAVKIIRIPDNDEIGALATRLENQF
IREVTLLSRLHHPNVVKFVGACKQPPVFCVVTEYLSEGSLRAYLHKLEHKSLILGKLIAL
SMDIARGMEYIHSQDIIHRDLKPENILISEEFHLKIADFGIACEEAYCDLLADDPGTYRW
MAPEMIKRKSYGRKVDVYGFGLILWEMVAGTIPYEDMTPVQAAFAVVNKNMRPPIPGDCP
PAMKALIELCWALQPEKRPEFWQIVKVLEQFESSVAHDGTLNLVQKSMLQDHKKGLHHWI
QKLGPVHQNASLHQIASSMPMPKPKFA

Transcript Sequence

Gene sequence data has not been registered.